The detailed information of tRNA gene sequence


Sequence ID>SRA1009090
Genome IDSRR020491.116342
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 42
End posion on genome 117
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ataaagtaat
tRNA gene sequence 
GGGGCCGTAGCTCAGATGGGAGAGCGCTTGAATGGCATTCAAGAGGTCGTCGGTTCGATC
CCGATCGGCTCCACTA
Downstream region at tRNA end position 
aataaaaaaa
Secondary structure (Cloverleaf model)
>SRA1009090	Ala	GGC
                   t      ACTA aataaaaaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T A G C C     A
      A G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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