The detailed information of tRNA gene sequence


Sequence ID>SRA1009106
Genome IDSRR020491.121417
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 183
End posion on genome 271
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cgaaagtaat
tRNA gene sequence 
GCTCGGGTGGTGGAATTGGTAGACACGTTGGACTTAAAATCCAATGAGCAGTAATGTTCG
TGCGGGTTCAAGTCCCGCCCCGAGTACGA
Downstream region at tRNA end position 
aagggatgat
Secondary structure (Cloverleaf model)
>SRA1009106	Leu	TAA
                   t      ACGA aagggatgat
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGAGCAGTAATGTTCGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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