The detailed information of tRNA gene sequence


Sequence ID>SRA1009120
Genome IDSRR020491.124715
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 56
End posion on genome 129
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tttttgtatT
tRNA gene sequence 
GCCGATATAGCTCAGCGGTAGAGCAACTGTCTCGTAAACAGTAGGTCATTGGTTCAATTC
CAATTATCGGCATtt
Downstream region at tRNA end position 
caaaagcaaa
Secondary structure (Cloverleaf model)
>SRA1009120	Thr	CGT
                   T      ATtt caaaagcaaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T T
                    T     T A A C C     A
        G A        A      | | | | |     A
      C     C T C G       A T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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