The detailed information of tRNA gene sequence


Sequence ID>SRA1009132
Genome IDSRR020491.127648
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 113
End posion on genome 183
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tacgaacttt
tRNA gene sequence 
GGTTCTTTATTTTAATGGTAGAATTCTCGGTTTGGGACCGTGAGATGCAGGTTCAATTCC
TGCAAGAACCCgtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1009132	Pro	TGG
                   t      Cgtn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     T - A
                     T - A          T T
                    T     C G T C C     A
        A A        A      | | | | |     A
      T     T T T T       G C A G G     C
      G     + | |                   T T
      G     G A A T
        T A        T     AGAT
                    C - G
                    T   T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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