The detailed information of tRNA gene sequence


Sequence ID>SRA1009137
Genome IDSRR020491.128540
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 65
End posion on genome 150
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actgattttT
tRNA gene sequence 
GCAGAGGTCGCCTAGCCTGGTAGGGCGCGGGCCTTGAGAGCCTGTGTTCGCAAGAACGCG
GGGGTTCAAATCCCTCTCTCTGCGTta
Downstream region at tRNA end position 
tttattttcc
Secondary structure (Cloverleaf model)
>SRA1009137	Ser	TGA
                   T      GTta tttattttcc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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