The detailed information of tRNA gene sequence


Sequence ID>SRA1009149
Genome IDSRR020491.132880
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 115
End posion on genome 192
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gacttctggt
tRNA gene sequence 
GGCCCTATCGTCTAGCCTGGCCCAGGACACCGCCCTCTCAAGGCGGAGACACGGGTTCAA
ATCCCGTTAGGGCTGCCA
Downstream region at tRNA end position 
tttatagacc
Secondary structure (Cloverleaf model)
>SRA1009149	Glu	CTC
                   t      GCCA tttatagacc
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C C A        A     AGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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