The detailed information of tRNA gene sequence


Sequence ID>SRA1009153
Genome IDSRR020491.134396
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 129
End posion on genome 218
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agtccaacac
tRNA gene sequence 
GGAGGGATGGCCGAGCGGACGAAGGCGGCGGTCTTGAAAACCGCTATACGGGCAACTGTA
TCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gttttaggca
Secondary structure (Cloverleaf model)
>SRA1009153	Ser	TGA
                   c      GCCA gttttaggca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    A       A G G C
      C G A        G     TATACGGGCAACTGTATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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