The detailed information of tRNA gene sequence


Sequence ID>SRA1009160
Genome IDSRR020491.135434
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 88
End posion on genome 13
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattgaat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGGAGAGCGGTGGTCTCCAAAACCACAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ttttgagctt
Secondary structure (Cloverleaf model)
>SRA1009160	Trp	CCA
                   t      GCCA ttttgagctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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