The detailed information of tRNA gene sequence


Sequence ID>SRA1009169
Genome IDSRR020491.138437
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 49
End posion on genome 140
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acacatattt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCGGCACCCTGCTAAGGTGTTTTAGGTGAAATATCC
TAACGTGGGTTCGAATCCCACCCTCTCCGCAA
Downstream region at tRNA end position 
attttttatt
Secondary structure (Cloverleaf model)
>SRA1009169	Ser	GCT
                   t      GCAA attttttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTAGGTGAAATATCCTAAC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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