The detailed information of tRNA gene sequence


Sequence ID>SRA1009170
Genome IDSRR020491.138590
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 266
End posion on genome 192
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aattaatgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAA
TCCTCCCCCCGCTACtt
Downstream region at tRNA end position 
caaaaaaccc
Secondary structure (Cloverleaf model)
>SRA1009170	Met	CAT
                   t      ACtt caaaaaaccc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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