The detailed information of tRNA gene sequence


Sequence ID>SRA1009181
Genome IDSRR020491.142146
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 129
End posion on genome 218
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccccgtcag
tRNA gene sequence 
GGAGGAGTGGGTGAGTGGCTGAAACCAGCACATTGCTAATGTGCCGTATGCGAAAGTGTA
CCGAGGGTTCGAATCCCTCCTCCTCCGCCA
Downstream region at tRNA end position 
accagccttc
Secondary structure (Cloverleaf model)
>SRA1009181	Ser	GCT
                   g      GCCA accagccttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTATGCGAAAGTGTACC
                    G - C
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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