The detailed information of tRNA gene sequence


Sequence ID>SRA1009208
Genome IDSRR020491.151017
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 99
End posion on genome 172
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atagcctgcc
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGGAGAGCGCCTGCTTTGCAAGCAGGAAGTCGGCGGTTCGATT
CCGCCTGGCTCCACtt
Downstream region at tRNA end position 
caggaagatg
Secondary structure (Cloverleaf model)
>SRA1009208	Ala	TGC
                   c      ACtt caggaagatg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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