The detailed information of tRNA gene sequence


Sequence ID>SRA1009216
Genome IDSRR020491.153005
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 79
End posion on genome 154
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atagtatttT
tRNA gene sequence 
GCCTCCGTAGCTCAGGTGGATAGAGCGTCTGCCTCCTAAGCAGAAGGCCCCAGGTTCGAG
TCCTGGCGGGGGCATgg
Downstream region at tRNA end position 
ccggaaaccc
Secondary structure (Cloverleaf model)
>SRA1009216	Arg	CCT
                   T      ATgg ccggaaaccc
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T G
                    T     G G T C C     A
      G G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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