The detailed information of tRNA gene sequence


Sequence ID>SRA1009223
Genome IDSRR020491.155482
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 117
End posion on genome 43
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagattattt
tRNA gene sequence 
GGCCCGTTCGTCTAGTGGTTAGGACTCAGGATTTTCATTCCTGCAACAGGGGTTCGATTC
CCCTACGGGCTACAA
Downstream region at tRNA end position 
aaaatctccg
Secondary structure (Cloverleaf model)
>SRA1009223	Glu	TTC
                   t      ACAA aaaatctccg
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          T     CAAC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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