The detailed information of tRNA gene sequence


Sequence ID>SRA1009224
Genome IDSRR020491.155679
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 123
End posion on genome 46
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atacgttatT
tRNA gene sequence 
GGGGCGGTTGTCTAGTCTGGTCTAAGATGTTTGCTTTGGGAGCAAGTGATCGGGAGTTCA
AATCTCCCTCGCCCCATac
Downstream region at tRNA end position 
aattctcctt
Secondary structure (Cloverleaf model)
>SRA1009224	Pro	TGG
                   T      ATac aattctcctt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C C C T C     A
    C T G A        T      | | | | |     A
  T         T C T G       G G G A G     C
  G         | | | +                 T T
  G         A G A T
    T C T A        G     TGATC
                    T + G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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