The detailed information of tRNA gene sequence


Sequence ID>SRA1009227
Genome IDSRR020491.157743
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 134
End posion on genome 62
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
acaaccttct
tRNA gene sequence 
GCCACCCTAGCTCAGTTGGTAGAGCAACTGATTCGTAATCAGTAGGTCGTCGGTTCGACT
CCGATGGGTGGCTtcc
Downstream region at tRNA end position 
tgtaaccccc
Secondary structure (Cloverleaf model)
>SRA1009227	Thr	CGT
                   t      Ttcc tgtaaccccc
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G          T C
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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