The detailed information of tRNA gene sequence


Sequence ID>SRA1009244
Genome IDSRR020491.162411
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 106
End posion on genome 31
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attaatattt
tRNA gene sequence 
AGGCAAGTGGCTCAATTGGTAGAGTGGCGGTCTCCAAAACCGTTGGTTGGGGGTTCGAGT
CCCTCCTTGCCTGCCA
Downstream region at tRNA end position 
aattaaggga
Secondary structure (Cloverleaf model)
>SRA1009244	Trp	CCA
                   t      GCCA aattaaggga
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     TGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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