The detailed information of tRNA gene sequence


Sequence ID>SRA1009251
Genome IDSRR020491.166175
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 184
End posion on genome 108
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
tcattgaatT
tRNA gene sequence 
GGGCTCGTTGCATAGCATGGATAGTGCGAACGCTTGCGGAGCGTTAGGTCGCCGGTTCAA
ATCCGGTCGGGCCCGTta
Downstream region at tRNA end position 
ttaaatttaa
Secondary structure (Cloverleaf model)
>SRA1009251	Arg	GCG
                   T      GTta ttaaatttaa
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     T G G C C     A
    A C G A        T      + | | | |     A
  T         T A C G       G C C G G     C
  G         + | | |                 T T
  G         G T G C
    A T A          G     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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