The detailed information of tRNA gene sequence


Sequence ID>SRA1009255
Genome IDSRR020491.167270
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 3
End posion on genome 80
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnntgT
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTATCC
Downstream region at tRNA end position 
gaattgaggg
Secondary structure (Cloverleaf model)
>SRA1009255	Met	CAT
                   T      ATCC gaattgaggg
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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