The detailed information of tRNA gene sequence


Sequence ID>SRA1009256
Genome IDSRR020491.167695
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 251
End posion on genome 176
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aagcttctat
tRNA gene sequence 
AGGAGTGTAGCTCAACTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position 
gcaaataggt
Secondary structure (Cloverleaf model)
>SRA1009256	Trp	CCA
                   t      GCCA gcaaataggt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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