The detailed information of tRNA gene sequence


Sequence ID>SRA1009281
Genome IDSRR020491.176906
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 125
End posion on genome 50
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gaatgcgaaT
tRNA gene sequence 
AGGCCAGTAGCTCTAATGGCTAGAGCGTCGGACTCCAAATCCGGTGGTTGGGGGTTCGAG
TCCCTCCTGGCCTGTat
Downstream region at tRNA end position 
tgaatttttg
Secondary structure (Cloverleaf model)
>SRA1009281	Trp	CCA
                   T      GTat tgaatttttg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     TGGTT
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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