The detailed information of tRNA gene sequence


Sequence ID>SRA1009288
Genome IDSRR020491.179448
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 172
End posion on genome 247
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cctagcatat
tRNA gene sequence 
CAGTGTGTAGCGCAGTGGCTGGCGCGCTTCGTTCGAGACGAAGAAGCCGGTGGTTCGAGT
CCACTCATCCTGACTA
Downstream region at tRNA end position 
ttgtttaatc
Secondary structure (Cloverleaf model)
>SRA1009288	Ser	CGA
                   t      ACTA ttgtttaatc
                     C - G
                     A - T
                     G - C
                     T   C
                     G + T
                     T - A
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    G       C G C G       G G T G G     C
    G       | | | |                 T T
    C       G C G C
      T G          G     AAGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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