The detailed information of tRNA gene sequence


Sequence ID>SRA1009289
Genome IDSRR020491.179669
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 15
End posion on genome 109
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcgaataat
tRNA gene sequence 
GGAGAGGTGGCCGAGTCTGGTTGAAGGCGCTTCCCTGCTAAGGAAGTAACGGGGTAACCC
CCCGTTCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aatacttcaa
Secondary structure (Cloverleaf model)
>SRA1009289	Ser	GCT
                   t      GCCA aatacttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAACGGGGTAACCCCCCGTTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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