The detailed information of tRNA gene sequence


Sequence ID>SRA1009301
Genome IDSRR020491.182138
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 145
End posion on genome 218
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagctgaatt
tRNA gene sequence 
GGCTGGGTAGCAAAGCGGTTATGCAGGGGCCTGCAAAGCCTTATAGACCGGTTCGACTCC
GGTCCCAGCCTCCA
Downstream region at tRNA end position 
tcataaaaaa
Secondary structure (Cloverleaf model)
>SRA1009301	Cys	GCA
                   t      TCCA tcataaaaaa
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T C
                    T     T G G C C     A
        G A        A      | | | | |     G
      C     A A C G       A C C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     ATAG
                    G + T
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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