The detailed information of tRNA gene sequence


Sequence ID>SRA1009324
Genome IDSRR020491.187525
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 106
End posion on genome 29
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagaagttca
tRNA gene sequence 
GGGGGTGTAGCTCAGTTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCGA
GTCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
gatttttgtc
Secondary structure (Cloverleaf model)
>SRA1009324	Asp	GTC
                   a      GCCA gatttttgtc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  T         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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