The detailed information of tRNA gene sequence


Sequence ID>SRA1009330
Genome IDSRR020491.189652
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 103
End posion on genome 179
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acacccataa
tRNA gene sequence 
GGAGCCTTAGCTCAGCTGGTTAGAGCGCTCCGCTCATAACGGAGTGGTCCGGGGTTCAAA
TCCCTGAGGCTCCACCA
Downstream region at tRNA end position 
ttaaaatcca
Secondary structure (Cloverleaf model)
>SRA1009330	Met	CAT
                   a      ACCA ttaaaatcca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     G T C C C     A
      C G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     TGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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