The detailed information of tRNA gene sequence


Sequence ID>SRA1009342
Genome IDSRR020491.193257
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 91
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcacatttca
tRNA gene sequence 
GGCACCGTCGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATCGGCGGTTCGAGTCC
GCCCGGTGCCTCCA
Downstream region at tRNA end position 
ttttcctcag
Secondary structure (Cloverleaf model)
>SRA1009342	Cys	GCA
                   a      TCCA ttttcctcag
                     G - C
                     G - C
                     C - G
                     A - T
                     C - G
                     C - G
                     G - C          T G
                    T     C C G C C     A
        G A        C      | | | | |     G
      T     A C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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