The detailed information of tRNA gene sequence


Sequence ID>SRA1009346
Genome IDSRR020491.197272
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 249
End posion on genome 174
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
atcttcttaT
tRNA gene sequence 
GGGAACGTGGGTTAGCTTGGTATACTGCCAGCCTCGGGCGCTGGAGATCATGGGTTCAAC
TCCCATCGTTCCCATtt
Downstream region at tRNA end position 
taattcaatc
Secondary structure (Cloverleaf model)
>SRA1009346	Pro	CGG
                   T      ATtt taattcaatc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     C - G
                     G - C          T C
                    T     T A C C C     A
      C G A        G      | | | | |     A
    T       T T G G       A T G G G     C
    T         | | +                 T T
    G       T A C T
      G T A        G     AGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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