The detailed information of tRNA gene sequence


Sequence ID>SRA1009351
Genome IDSRR020491.198687
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 60
End posion on genome 135
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttgtcactaa
tRNA gene sequence 
GGCCCAGTGGCGCAATGGATAGCGCGCACGCCTTCGGAGCGTGAGGTTGTGGGTTCGAGT
CCCATCTGGGTCGCCA
Downstream region at tRNA end position 
ttttttgcct
Secondary structure (Cloverleaf model)
>SRA1009351	Arg	TCG
                   a      GCCA ttttttgcct
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T A C C C     A
      T A A        G      + | | | |     G
    G       C G C G       G T G G G     C
    G       | | | |                 T T
    A       G C G C
      T A          G     AGGTT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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