The detailed information of tRNA gene sequence


Sequence ID>SRA1009363
Genome IDSRR020491.203893
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 163
End posion on genome 238
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgctcccttt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCACCTGGTTTGCATCCAGGAGGTCGTCGGTTCGATC
CCGACTGGCTCCACCA
Downstream region at tRNA end position 
aagtgttgaa
Secondary structure (Cloverleaf model)
>SRA1009363	Ala	TGC
                   t      ACCA aagtgttgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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