The detailed information of tRNA gene sequence


Sequence ID>SRA1009368
Genome IDSRR020491.205313
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 1
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcaccaat
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGTTTAGAGCGCCTGCCTGTCACGCAGGAAGTCGCGAGTTCGA
GTCTCGTCACTCCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1009368	Asp	GTC
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G C T C     A
    T T G A        A      + | | | |     G
  G         C T C G       G C G A G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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