The detailed information of tRNA gene sequence


Sequence ID>SRA1009373
Genome IDSRR020491.206457
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 12
End posion on genome 103
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
gagccggtac
tRNA gene sequence
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTATTCTGAGAAATTGG
AATCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position
cgcgaaaact
Secondary structure (Cloverleaf model)
>SRA1009373	Ser	GCT
                   c      GCCA cgcgaaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATTCTGAGAAATTGGAATC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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