The detailed information of tRNA gene sequence


Sequence ID>SRA1009379
Genome IDSRR020491.207956
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 201
End posion on genome 111
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgatgatcga
tRNA gene sequence 
GGAGAGTTGCCAGAGCGGACGAATGGGCTCGCTTGGAAAGCGTGTGAGGTCTAACCGGCC
TCCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
tgaacgacga
Secondary structure (Cloverleaf model)
>SRA1009379	Ser	GGA
                   a      GCCA tgaacgacga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G         | | |                 T T
    A       A T G G
      C G A        G     TGAGGTCTAACCGGCCTCC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK