The detailed information of tRNA gene sequence


Sequence ID>SRA1009389
Genome IDSRR020491.211075
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 193
End posion on genome 104
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttatcgagac
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATGGGCTAACACCCA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
attgccttat
Secondary structure (Cloverleaf model)
>SRA1009389	Ser	GCT
                   c      GCCA attgccttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATGGGCTAACACCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK