The detailed information of tRNA gene sequence


Sequence ID>SRA1009395
Genome IDSRR020491.212528
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 235
End posion on genome 158
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gagagcccaa
tRNA gene sequence 
GGGCCTGTAGGTTAGTTTGGCCTATACTTCGCGGCTGGGGGTCGCGCGACCCAGGTTCAA
ATCCTGGCAGGCCCACCT
Downstream region at tRNA end position 
ttttcgcttc
Secondary structure (Cloverleaf model)
>SRA1009395	Pro	GGG
                   a      ACCT ttttcgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G T C C     A
    T T G A        A      | | | | |     A
  T         T T G G       C C A G G     C
  G           | | +                 T T
  G         T A C T
    C C T A        T     CGAC
                    C - G
                    G - C
                    C - G
                    G - C
                    G + T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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