The detailed information of tRNA gene sequence


Sequence ID>SRA1009400
Genome IDSRR020491.213650
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 179
End posion on genome 96
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
agaaaggtac
tRNA gene sequence 
GGGCGAATGGCGGAACTGGTAGACGCGCAGGACTCAAAATCCTGTGGTAGCAATACTGTG
AGAGTTCGACTCTCTCTTTGCCCAacc
Downstream region at tRNA end position 
aaaaataaat
Secondary structure (Cloverleaf model)
>SRA1009400	Leu	CAA
                   c      Aacc aaaaataaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     A - T
                     A - T          T C
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTAGCAATACTGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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