The detailed information of tRNA gene sequence


Sequence ID>SRA1009402
Genome IDSRR020491.215883
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 158
End posion on genome 234
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gaaacgatat
tRNA gene sequence 
GCTCCGATAGCTCAGCCTGGTAGAGCGTTACATTGGTAATGTAAAGGTCGTGGGTTCAGA
TCCCGCTCGGAGCTTCA
Downstream region at tRNA end position 
ataattctta
Secondary structure (Cloverleaf model)
>SRA1009402	Thr	GGT
                   t      TTCA ataattctta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C G C C C     G
      C G A        A      | + | | |     A
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    T - A
                    T - A
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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