The detailed information of tRNA gene sequence


Sequence ID>SRA1009408
Genome IDSRR020491.217748
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 182
End posion on genome 93
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcagataaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTATAGGAGAAATCCTA
TCATGGGTTCGAATCCCATTCTCTCCGCCA
Downstream region at tRNA end position 
tttcacaatt
Secondary structure (Cloverleaf model)
>SRA1009408	Ser	GGA
                   a      GCCA tttcacaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGAGAAATCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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