The detailed information of tRNA gene sequence


Sequence ID>SRA1009420
Genome IDSRR020491.221426
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 231
End posion on genome 146
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caatcctgct
tRNA gene sequence 
GCAGACGTCGCTTAGCCTGGTATAGCGCCGGATTTGAAATCCGGTGTCCTTGTGACTCGG
GAGTTCAAATCTCTCCGTCTGCGCCA
Downstream region at tRNA end position 
ctatcactcg
Secondary structure (Cloverleaf model)
>SRA1009420	Ser	TGA
                   t      GCCA ctatcactcg
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | + | | |     A
    C       T T C G       G G G A G     C
    T         | | |                 T T
    G       T A G C
      G T A        G     TGTCCTTGTGACTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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