The detailed information of tRNA gene sequence


Sequence ID>SRA1009421
Genome IDSRR020491.221770
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 84
End posion on genome 158
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
ttattgatac
tRNA gene sequence
GGTGAGGTAGTACAGTCCGGCAGTGCGTGGGCCTGCAAAGCCCGAAGTCGAGAGTTCAAA
TCTCTCCCTCACCTCtt
Downstream region at tRNA end position
tgatcttggt
Secondary structure (Cloverleaf model)
>SRA1009421	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
      T G A        A      | | | | |     A
    C       C A T G       G A G A G     C
    C       | | + |                 T T
    G       G T G C
      G C A        G     AAGTC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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