The detailed information of tRNA gene sequence


Sequence ID>SRA1009422
Genome IDSRR020491.221882
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 182
End posion on genome 258
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aactttcctc
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGTTAGAGCAGTCGACTCATAATCGATTGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACCA
Downstream region at tRNA end position 
tattgaaaaa
Secondary structure (Cloverleaf model)
>SRA1009422	Met	CAT
                   c      ACCA tattgaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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