The detailed information of tRNA gene sequence


Sequence ID>SRA1009429
Genome IDSRR020491.224815
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 65
End posion on genome 141
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttgcagcagt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCAGGTAGCGTACCTGCATGGGGTGCAGGGGGTCGCCCGTTCGAA
TCGGGCCGCCCCGACCA
Downstream region at tRNA end position 
aaaccttgaa
Secondary structure (Cloverleaf model)
>SRA1009429	Pro	GGG
                   t      ACCA aaaccttgaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C G G G C     A
      C G A        A      | | | | |     G
    C       C G C G       G C C C G     C
    A       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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