The detailed information of tRNA gene sequence


Sequence ID>SRA1009430
Genome IDSRR020491.225160
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 177
End posion on genome 253
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgccttttc
tRNA gene sequence 
GGGCCAGTAGCTCAGCCGGTTAGAGCGCAGTCCTGATAAGACTGAGGTCCCTGGTTCGAG
TCCAGGCTGGCCCACCA
Downstream region at tRNA end position 
gacgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1009430	Ile	GAT
                   c      ACCA gacgnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     G G A C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    T - A
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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