The detailed information of tRNA gene sequence


Sequence ID>SRA1009432
Genome IDSRR020491.226030
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 16
End posion on genome 106
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagcgaatgt
tRNA gene sequence 
GGAGGGGTGGCCGAGCGGTCTAAGGCGGCGGTCTTGAAAACCGCTTCCCGGCTTTGTCGG
GACGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
gcacccagtg
Secondary structure (Cloverleaf model)
>SRA1009432	Ser	TGA
                   t      GCCA gcacccagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TTCCCGGCTTTGTCGGGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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