The detailed information of tRNA gene sequence


Sequence ID>SRA1009437
Genome IDSRR020491.227817
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 185
End posion on genome 110
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tttcacgagt
tRNA gene sequence 
GCCCATATAGCTCAGATGGTAGAGCACTTCCATGGTAAGGAAGAGGTCGTGTGTTCGATT
CACACTGTGGGCACCA
Downstream region at tRNA end position 
ataaaaatta
Secondary structure (Cloverleaf model)
>SRA1009437	Thr	GGT
                   t      ACCA ataaaaatta
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T + G
                     A - T          T T
                    T     C A C A C     A
      A G A        A      | | | | |     G
    T       C T C G       G T G T G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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