The detailed information of tRNA gene sequence


Sequence ID>SRA1009443
Genome IDSRR020491.230231
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 180
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aactggaaga
tRNA gene sequence 
GGGGCTGTAGCTCAATTGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCGTCGGTTCGATT
CCGATCAGCTCCACCA
Downstream region at tRNA end position 
gtcagtgatc
Secondary structure (Cloverleaf model)
>SRA1009443	Ala	TGC
                   a      ACCA gtcagtgatc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     T A G C C     A
      T A A        A      + | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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