The detailed information of tRNA gene sequence


Sequence ID>SRA1009458
Genome IDSRR020491.238538
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 239
End posion on genome 165
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
ggtttttttT
tRNA gene sequence 
GCGGCTGTAGCTCAGTGGTTAGAGCGCCGTTCTTATAAAGCGGTGGTCGTGGGTTCGATT
CCCACCAGCCGTATtc
Downstream region at tRNA end position 
ccctcaagtt
Secondary structure (Cloverleaf model)
>SRA1009458	Ile	TAT
                   T      ATtc ccctcaagtt
                     G + T
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    T - A
                  C       A
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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