The detailed information of tRNA gene sequence


Sequence ID>SRA1009471
Genome IDSRR020491.242720
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 120
End posion on genome 209
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctcgttttg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGGTTAAACCTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
accaaggctg
Secondary structure (Cloverleaf model)
>SRA1009471	Ser	GCT
                   g      GCCA accaaggctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGTTAAACCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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