The detailed information of tRNA gene sequence


Sequence ID>SRA1009480
Genome IDSRR020491.245578
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 255
End posion on genome 163
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggccgatttt
tRNA gene sequence 
GGAGAGGTGCTAGAGTGGCCGAATAGGCGCGATTGGAAATCGCGTGTCCTGTTAACTGCG
GGACCATGGGTTCGAATCCCATCCTCTCCGCCT
Downstream region at tRNA end position 
attttttctt
Secondary structure (Cloverleaf model)
>SRA1009480	Ser	GGA
                   t      GCCT attttttctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A T C       A T G G G     C
    G         | | |                 T T
    C       A T A G
      C G A        G     TGTCCTGTTAACTGCGGGACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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