The detailed information of tRNA gene sequence


Sequence ID>SRA1009485
Genome IDSRR020491.247245
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 238
End posion on genome 165
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gggtctcttc
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCACTTGCATGGCATGCAAGGGGTCAGGGGTTCAATT
CCCCTTAGCTCCACgc
Downstream region at tRNA end position 
gaaaaataga
Secondary structure (Cloverleaf model)
>SRA1009485	Ala	GGC
                   c      ACgc gaaaaataga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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